Browse of TCMCG007C53828 protein

CDS

Accession Number	TCMCG007C53828
gbkey	CDS
Protein Id	XP_009113384.2
Location	complement(join(11945205..11945372,11945496..11945645,11945720..11945970,11946048..11946084,11946178..11946270,11946341..11946448,11946604..11946725,11946809..11946858,11946942..11947099,11947194..11947287,11947363..11947532,11947618..11947815,11947904..11948026,11948136..11948231,11948323..11948433,11948510..11948585,11948686..11948737,11948836..11948914,11948993..11949080,11949275..11949323,11949558..11949682,11949824..11949882,11950028..11950127,11950233..11950327,11950414..11950470,11950549..11950649,11950739..11951105))
Gene	LOC103838684
GeneID	103838684
Organism	Brassica rapa

Protein

Length	1058aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009115136.3
Definition	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Low-density lipoprotein-receptor YWTD domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009416        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009532        [VIEW IN EMBL-EBI] GO:0009534        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009570        [VIEW IN EMBL-EBI] GO:0009579        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0010196        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0031976        [VIEW IN EMBL-EBI] GO:0031984        [VIEW IN EMBL-EBI] GO:0034357        [VIEW IN EMBL-EBI] GO:0042651        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044434        [VIEW IN EMBL-EBI] GO:0044435        [VIEW IN EMBL-EBI] GO:0044436        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:1990066        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTTTGAAACTCTGCTCATCATCCTCCTCACCTTCACTTTTCTTCCAATCATCAAGGAGATCTTCTTATTCTTCTCCTCTTAATACAATTAGATCAAAACCCACTGCAAGATCATCTTCCTTTCCAGGATTCCGCTGTGTCTCTCAGGCTCGTTTACCGTCATTCAAAGTGAGTGTTGCCGCGGAGAGCCCTCCGTCGACGACGACAGAGGCGGATGACTGGGGGAAGGTATCCGCGGTGCTATTCGATATGGACGGCGTGCTTTGCAACAGCGAGGATCTCTCGAGAAGAGCAGCAGTGGATGTCTTCACAGAGATGGGAGTTGAAGTCACTGTTGATGACTTCGTTCCTTTCATGGGGACAGGTGAAGCTAAGTTCTTAGGAGGTGTTGCTTCTGTTAAAGGAGTTCAAGGGTTTGATCCTGATGCAGCTAAAAAACGCTTCTTTGAAATATATCTTGATAAGTATGCGAAGCCAGAGTCTGGAATTGGATTTCCAGGAGCACTAGAGCTTGTTACTGAGTGTAAGAACAGAGGTCTAAAAGTCGCTGTTGCTTCTAGCGCCGACCGTGTCAAAGTTGATGCAAACCTTGCAGCCGCTGGTTTGTCTTTGACCATGTTTGATGCAATTGTATCAGCAGACGCATTTGAGAACTTGAAACCAGCTCCAGATATTTTCTTGGCTGCTTCCAAGATCTTGGGTGTGCCCACAAGCGAGTGTATTGTTATTGAGGATGCACTTGCTGGAGTCCAGGCTGCTCAAGCTGCAAACATGAGATGCATAGCTGTGAAAACTACTTTATCTGAAGCAATTCTTAAGGATGCTGGTCCGTCAATGATCAGAGACGATATCGGAAACATATCAATCAATGACATTCTCACTGGTGGCTCTGATTCTACCAGAAAACAACATCAAGAGAACACTGCCAGCGACAAAACCAATAACAACGGGTTTCAGGGTTCTCGTCGAGATATATTGAGGTATGGGAGTCTTGGAATTGCTCTTTCTTGTGTTTACTTCGCCGCCAACAACTGGAAGGCAATGCAATATGCTTCTCCACAAGCTTTGTGGAATGCATTGGTTGGAACAAAAAGCCCTTCTTTTACTCAGAACCAAGGTGAAGGGAGAGTTCAACAGTTCGTGGAGTACATTGCCGATCTAGAGAGCAAGCAAACAGCTACAACTGTTCCGGAATTCCCATCTAAACTAGATTGGCTAAACACTGCCCCTCTCCAGTTTCGCCGGGATTTGAAAGGGAAAGTGGTGGTACTTGATTTTTGGACTTACTGCTGCATAAACTGTATGCATGTATTACCAGATCTTGAGTTTCTTGAGAAGAAGTATGCAGACAAGCCATTTACTGTTGTGGGTGTACACTCGGCTAAGTTTGACAACGAGAAGGACTTAGAAGCCATACGAAATGCAGTTCTACGCTATGACATCAGCCATCCGGTTGTGAACGATGGAGACATGTACATGTGGAGAGAGCTTGGCATCAATTCGTGGCCGACATTTGCTGTTGTCTCACCAAATGGTAAAGTCATTGCACAGATTGCCGGAGAAAGTCACCGCAAAGATCTTGATGACTTGGTGGCAGCAGCTCTAATATACTATGGTGGGAAGAATGTTTTAGACAGTACTCCCCTTCCTACACGTTTGGAGAAAGATAACGATCCGCGCTTGGCCGCATCTCCACTGAAATTCCCAGGGAAGCTGGCCATTGATACTCTTAACAACAGGCTATTTATCTCAGACAGTAACCATAACCGCATTATCGTAACTGATCTTGACGGTAATTTCATCGTCCAAATCGGTAGTACCGGAGAAGAAGGTTTCCGTGATGGTTCCTTTGAAGATGCTGCATTCAATCGTCCTCAGGGACTTGCTTATAATGCAAAGAAAAATATTCTTTATGTTGCTGACACCGAGAATCATGCTTTGAGGGAGATTGATTTTGTCAACGAGAGGGTAGAGACTCTGGCTGGTAATGGGACTAAAGGCTCAGATTACCAAGGTGGAAGAAAAGGAACCTCACAGCTTTTGAATTCTCCGTGGGATGTATGCTATGAGCCGGTGAAAGAGAAGGTCTACGTTGCAATGGCGGGTCAGCACCAGATTTGGGAATACAATGTGCTTGATGGTGTTACTAAAGTGTTCAGTGGAAATGGCTATGAAAGAAACCTTAACGGTTCTACCGCTCAAACGACATCGTTTGCTCAGCCTTCAGGAATCTCATTAGGCCCTGATTTGAAGGAAGCATATATTGCGGATAGCGAGAGCAGTTCTATTCGTGCCCTTGATCTTCAAACTGGAGGATCAAGATTGCTCGCTGGTGGTGATCCTTATTTCTCTGAGAATCTTTTCAAGTTTGGAGATAATGACGGTGTGGGAGCAGAAGTGCTCCTGCAACATCCACTTGGTGTGTTATGCGCAAAGGATGGTCAAATATATCTAGCTGATAGCTACAACCACAAGATTAAGAAGCTGGACCCTGTGACAAAACGTGTTGTTACTATCGCTGGGACAGGAAAAGCTGGTTTCAAAGATGGGAAGGTTATGGTTGCTCAGCTTTCAGAGCCTGCAGGACTTGCTCTAACTGAAAACGGGAGGCTTTTCATTGCGGATACAAACAATAGTCTTATACGTTGCATAGATTTGAACAACAGAGAAGATGTAGAGATTCGTACACTGGAGTTAAAAGGCGTTCAACCGCCAATGCCGAAGGCGAAATCATTGAAACGTTTGAGGAAACGTGCTTCGGCTGATACAAAGATTGTCACAGTGGATGCTGTTACATCTCGCGAAGGAGATTTGAATCTTAAAATCTCATTACCAGATGGCTACCATTTCTCCAAGGAAGCGCGGAGTAAGTTTGTGGTTGATGTGGAGCCTGAAGACGCAGTGACGGTCGAACCATTGGAAGGAATCCTTGGCCCTGAAGGTTCTACGGTGCTTCATTACAGACAATCTTCAACTTCTGCTTCTGTTGGGAAAATCAGTTGCAAGTTGCAGGTGTACTATTGCAAAGAAGACGAGGTTTGCTTGTACCAGTCTGTTCAGTTTGAGGTACCTTTCAAGATGGAATCAGAATCATCTTCTTCTCAGGTGATCGCATTCACCGTTAAACCTAGAGCATCAGATGCCGGCGGATTACAGCTTCAAGCTACTAGCTAA

Protein:   MALKLCSSSSSPSLFFQSSRRSSYSSPLNTIRSKPTARSSSFPGFRCVSQARLPSFKVSVAAESPPSTTTEADDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFTEMGVEVTVDDFVPFMGTGEAKFLGGVASVKGVQGFDPDAAKKRFFEIYLDKYAKPESGIGFPGALELVTECKNRGLKVAVASSADRVKVDANLAAAGLSLTMFDAIVSADAFENLKPAPDIFLAASKILGVPTSECIVIEDALAGVQAAQAANMRCIAVKTTLSEAILKDAGPSMIRDDIGNISINDILTGGSDSTRKQHQENTASDKTNNNGFQGSRRDILRYGSLGIALSCVYFAANNWKAMQYASPQALWNALVGTKSPSFTQNQGEGRVQQFVEYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYADKPFTVVGVHSAKFDNEKDLEAIRNAVLRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGESHRKDLDDLVAAALIYYGGKNVLDSTPLPTRLEKDNDPRLAASPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDLDGNFIVQIGSTGEEGFRDGSFEDAAFNRPQGLAYNAKKNILYVADTENHALREIDFVNERVETLAGNGTKGSDYQGGRKGTSQLLNSPWDVCYEPVKEKVYVAMAGQHQIWEYNVLDGVTKVFSGNGYERNLNGSTAQTTSFAQPSGISLGPDLKEAYIADSESSSIRALDLQTGGSRLLAGGDPYFSENLFKFGDNDGVGAEVLLQHPLGVLCAKDGQIYLADSYNHKIKKLDPVTKRVVTIAGTGKAGFKDGKVMVAQLSEPAGLALTENGRLFIADTNNSLIRCIDLNNREDVEIRTLELKGVQPPMPKAKSLKRLRKRASADTKIVTVDAVTSREGDLNLKISLPDGYHFSKEARSKFVVDVEPEDAVTVEPLEGILGPEGSTVLHYRQSSTSASVGKISCKLQVYYCKEDEVCLYQSVQFEVPFKMESESSSSQVIAFTVKPRASDAGGLQLQATS